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  5. Nbi_g08262

Nbi_g08262 (SAG18)


Aliases : SAG18

Description : not classified & original description: none


Gene families : OG0003107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08262
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Adi_g015086 SAG18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19348 SAG18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12548 SAG18 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g011180 SAG18 not classified & original description: CDS=48-1007 0.03 OrthoFinder output from all 47 species
Dde_g09704 SAG18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11975 SAG18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17027 SAG18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29638 SAG18 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11427 SAG18 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e028281_P001 SAG18, Zm00001e028281 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!