GSVIVT01038708001


Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family SET domain protein 16 (SDG16)


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01038708001
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT4G27910 ATX4, SDG16 SET domain protein 16 0.02 Gene family
Cre11.g475950 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.01 Gene family
LOC_Os01g11952 Os01g0218800 No description available 0.03 Gene family
LOC_Os01g46700 Os01g0655250,... 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
LOC_Os12g41900 Os12g0613200 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Zm00001d023333 GRMZM2G473138 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
Zm00001d039355 GRMZM2G085176,... 27.3.69 RNA.regulation of transcription.SET-domain... 0.07 Gene family
Zm00001d044020 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000313 PWWP_dom 197 291
IPR001214 SET_dom 887 992
IPR019787 Znf_PHD-finger 390 443
No external refs found!