GSVIVT01038670001

Description : 29.2.1.2.2.9 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9 Ribosomal protein L6 family

Gene families : OG_01_0002371 (Gene family) Phylogenetic Tree(s): OG0002371_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): GSVIVT01038670001
Cluster	HCCA cluster: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AT1G33120	No alias	Ribosomal protein L6 family	0.03	Gene family
AT1G33140	PGY2	Ribosomal protein L6 family	0.03	Gene family
AT4G10450	No alias	Ribosomal protein L6 family	0.09	Gene family
Cpa\|evm.model.tig00001532.12	No alias	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.14	Gene family
Cre12.g494050	No alias	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.17	Gene family
GSVIVT01016795001	No alias	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.07	Gene family
LOC_Os02g01332	Os02g0103700	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.13	Gene family
LOC_Os09g31180	Os09g0485900	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.12	Gene family
MA_38141g0010	No alias	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.03	Gene family
Smo269009	PACid_15414070	No description available	0.03	Gene family
Solyc06g073310.3.1	Solyc06g073310.3	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.15	Gene family
Solyc12g096700.2.1	Solyc12g096700.2	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.17	Gene family
Zm00001d045578	GRMZM2G084739	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.1	Gene family
Zm00001d054084	No alias	29.2.1.2.2.9 protein.synthesis.ribosomal...	0.08	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan
BP	GO:0006412	translation	IEA	InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR020040	Ribosomal_L6_a/b-dom	8	87

External Links

No external refs found!

GSVIVT01038670001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation