AT1G03680 (ATHM1, THM1, TRX-M1, ATM1)

Aliases : ATHM1, THM1, TRX-M1, ATM1

Description : thioredoxin M-type 1

Gene families : OG_01_0000516 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000516_tree ,
OG_02_0000996 (LandPlants) Phylogenetic Tree(s): OG_02_0000996_tree ,
OG_03_0001150 (SeedPlants) Phylogenetic Tree(s): OG_03_0001150_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G03680
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.15	Archaeplastida
Cpa\|evm.model.tig00001477.10	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.03	Archaeplastida
Cre01.g052250	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.03	Archaeplastida
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.09	Archaeplastida
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.08	Archaeplastida
GSVIVT01026149001	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.07	Archaeplastida
GSVIVT01034548001	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.1	Archaeplastida
Gb_00914	No alias	M-type thioredoxin	0.06	Archaeplastida
Gb_31181	No alias	M-type thioredoxin	0.07	Archaeplastida
Gb_37068	No alias	no hits & (original description: none)	0.07	Archaeplastida
LOC_Os04g57930.1	No alias	X-type thioredoxin	0.08	Archaeplastida
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.08	Archaeplastida
MA_10433314g0010	No alias	X-type thioredoxin	0.07	Archaeplastida
MA_474303g0010	No alias	M-type thioredoxin	0.02	Archaeplastida
Mp4g18950.1	No alias	M-type thioredoxin	0.15	Archaeplastida
Pp3c24_4980V3.1	No alias	thioredoxin X	0.13	Archaeplastida
Pp3c25_2880V3.1	No alias	thioredoxin M-type 1	0.12	Archaeplastida
Pp3c26_10440V3.1	No alias	thioredoxin Y2	0.02	Archaeplastida
Pp3c5_23070V3.1	No alias	thioredoxin M-type 1	0.08	Archaeplastida
Pp3c6_10040V3.1	No alias	Thioredoxin superfamily protein	0.16	Archaeplastida
Pp3c6_10090V3.1	No alias	thioredoxin M-type 1	0.03	Archaeplastida
Smo230724	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.04	Archaeplastida
Solyc01g008250.3.1	No alias	X-type thioredoxin	0.16	Archaeplastida
Solyc07g063190.3.1	No alias	M-type thioredoxin	0.07	Archaeplastida
Solyc10g006970.3.1	No alias	M-type thioredoxin	0.05	Archaeplastida
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.18	Archaeplastida
Zm00001e006545_P001	No alias	no hits & (original description: none)	0.11	Archaeplastida
Zm00001e008102_P001	No alias	M-type thioredoxin	0.01	Archaeplastida
Zm00001e018385_P001	No alias	M-type thioredoxin	0.09	Archaeplastida
Zm00001e039586_P001	No alias	M-type thioredoxin	0.17	Archaeplastida
Zm00001e041929_P001	No alias	X-type thioredoxin	0.03	Archaeplastida
AMTR_s00017p00209370	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.01	LandPlants
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.13	LandPlants
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.08	LandPlants
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.07	LandPlants
Gb_00914	No alias	M-type thioredoxin	0.05	LandPlants
Gb_31181	No alias	M-type thioredoxin	0.07	LandPlants
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.07	LandPlants
MA_474303g0010	No alias	M-type thioredoxin	0.03	LandPlants
Mp4g18950.1	No alias	M-type thioredoxin	0.13	LandPlants
Pp3c25_2880V3.1	No alias	thioredoxin M-type 1	0.12	LandPlants
Pp3c5_23070V3.1	No alias	thioredoxin M-type 1	0.08	LandPlants
Pp3c6_10040V3.1	No alias	Thioredoxin superfamily protein	0.16	LandPlants
Pp3c6_10090V3.1	No alias	thioredoxin M-type 1	0.02	LandPlants
Smo230724	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.04	LandPlants
Solyc07g063190.3.1	No alias	M-type thioredoxin	0.07	LandPlants
Solyc10g006970.3.1	No alias	M-type thioredoxin	0.04	LandPlants
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.18	LandPlants
Zm00001e008102_P001	No alias	M-type thioredoxin	0.01	LandPlants
Zm00001e018385_P001	No alias	M-type thioredoxin	0.07	LandPlants
Zm00001e039586_P001	No alias	M-type thioredoxin	0.14	LandPlants
AMTR_s00017p00209370	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.01	SeedPlants
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.13	SeedPlants
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.08	SeedPlants
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.07	SeedPlants
Gb_00914	No alias	M-type thioredoxin	0.05	SeedPlants
Gb_31181	No alias	M-type thioredoxin	0.07	SeedPlants
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.07	SeedPlants
MA_474303g0010	No alias	M-type thioredoxin	0.03	SeedPlants
Solyc07g063190.3.1	No alias	M-type thioredoxin	0.07	SeedPlants
Solyc10g006970.3.1	No alias	M-type thioredoxin	0.04	SeedPlants
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.18	SeedPlants
Zm00001e008102_P001	No alias	M-type thioredoxin	0.01	SeedPlants
Zm00001e018385_P001	No alias	M-type thioredoxin	0.07	SeedPlants
Zm00001e039586_P001	No alias	M-type thioredoxin	0.14	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	RCA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006979	response to oxidative stress	IGI	Interproscan
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008047	enzyme activator activity	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009409	response to cold	RCA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009657	plastid organization	RCA	Interproscan
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	RCA	Interproscan
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
CC	GO:0010319	stromule	IDA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043085	positive regulation of catalytic activity	IDA	Interproscan
BP	GO:0043085	positive regulation of catalytic activity	RCA	Interproscan
BP	GO:0043086	negative regulation of catalytic activity	IDA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	78	176

External Links

No external refs found!

AT1G03680 (ATHM1, THM1, TRX-M1, ATM1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation