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  5. Nbi_g08132

Nbi_g08132 (MEE33, MSD1, ATMSD1)


Aliases : MEE33, MSD1, ATMSD1

Description : manganese superoxide dismutase *(MSD) & original description: none


Gene families : OG0002265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08132

Target Alias Description ECC score Gene Family Method Actions
Tin_g06417 MEE33, MSD1, ATMSD1 manganese superoxide dismutase *(MSD) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 32 110
IPR019832 Mn/Fe_SOD_C 120 222
No external refs found!