GSVIVT01038546001


Description : 10.8.1 cell wall.pectin*esterases.PME Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_01_0000075 (Gene family) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01038546001
Cluster HCCA cluster: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.05 Gene family
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.02 Gene family
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Gene family
AT4G00190 PME38, ATPME38 pectin methylesterase 38 0.03 Gene family
GSVIVT01018622001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
GSVIVT01027652001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.04 Gene family
GSVIVT01031667001 No alias 10.8.99 cell wall.pectin*esterases.misc pectin... 0.03 Gene family
GSVIVT01037348001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
LOC_Os01g57854 Os01g0788400 10.8.1 cell wall.pectin*esterases.PME methylesterase PCR... 0.02 Gene family
LOC_Os02g54190 Os02g0783000 10.8.1 cell wall.pectin*esterases.PME pectin... 0.02 Gene family
LOC_Os06g09340 Os06g0193200 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
LOC_Os07g47830 Os07g0675100 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.02 Gene family
MA_158002g0020 No alias 10.8.1 cell wall.pectin*esterases.PME pectin... 0.02 Gene family
MA_354248g0010 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
MA_436039g0010 No alias No description available 0.02 Gene family
Smo266995 PACid_15412289 No description available 0.02 Gene family
Solyc01g091050.3.1 Solyc01g091050.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
Solyc02g080220.3.1 Solyc02g080220.3 10.8.1 cell wall.pectin*esterases.PME methylesterase PCR... 0.02 Gene family
Solyc03g123620.4.1 Solyc03g123620.4 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.06 Gene family
Solyc05g047590.3.1 Solyc05g047590.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.03 Gene family
Zm00001d015934 GRMZM2G008593 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 37 334
No external refs found!