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  5. Nbi_g08052

Nbi_g08052


Description : small GTPase *(Sar1) & original description: none


Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08052

Target Alias Description ECC score Gene Family Method Actions
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.02 OrthoFinder output from all 47 species
Aspi01Gene15580.t1 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02078 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18185 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31785 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018792 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: CDS=186-767 0.02 OrthoFinder output from all 47 species
Spa_g40971 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021337_P001 Zm00001e021337 GTPase (Sar1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 7 191
No external refs found!