1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g08042

Nbi_g08042 (ATEXPA1, EXP1,...)


Aliases : ATEXPA1, EXP1, AT-EXP1, EXPA1, ATEXP1, ATHEXP ALPHA 1.2

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08042

Target Alias Description ECC score Gene Family Method Actions
Aop_g20874 ATEXPA4, ATEXP4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21879 ATEXPA10,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21880 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene29952.t1 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38493.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66971.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28211 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24717 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Smo236978 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e041519_P002 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 99 187
IPR007117 Expansin_CBD 198 248
No external refs found!