Nbi_g07928


Description : not classified & original description: none


Gene families : OG0005617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07928

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00191420 ABO5,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Adi_g014392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20164 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Als_g04436 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Als_g56987 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Aop_g09293 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G062900.1 Ceric.08G062900 mitochondrial RNA splicing factor *(ABO5) & original... 0.06 OrthoFinder output from all 47 species
Dac_g45786 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g11869 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Dde_g24980 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g13340.1 ABO5, LOC_Os02g13340 ABO5 mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Lfl_g34233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08999 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020774 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s3707.g028947 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Tin_g10630 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Tin_g26992 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 598 645
IPR002885 Pentatricopeptide_repeat 321 368
IPR002885 Pentatricopeptide_repeat 256 281
IPR002885 Pentatricopeptide_repeat 498 526
IPR002885 Pentatricopeptide_repeat 289 317
IPR002885 Pentatricopeptide_repeat 533 561
IPR002885 Pentatricopeptide_repeat 567 594
IPR002885 Pentatricopeptide_repeat 184 211
IPR002885 Pentatricopeptide_repeat 462 488
No external refs found!