Nbi_g07789 details
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- Species
- Nephrolepis biserrata
- Sequence
- Nbi_g07789
Nbi_g07789
Description : histone *(H3) & original description: none
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type | Description | Actions |
Neighborhood | HRR: Nbi_g07789 | |
Expression Context Conservation (ECC)
Target | Alias | Description | ECC score | Gene Family Method | Actions |
AMTR_s00018p00168040 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00225p00023630 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | OrthoFinder output from all 47 species | |
AT1G09200 | No alias | Histone superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G27360 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G40040 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G10390 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G10400 | No alias | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G65360 | No alias | Histone superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Ala_g26587 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g33085 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene02058.t1 | Aspi01Gene02058 | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene58554.t1 | Aspi01Gene58554 | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G075200.1 | Ceric.06G075200 | histone *(H3) & original description: pacid=50619967... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G013500.1 | Ceric.10G013500 | histone *(H3) & original description: pacid=50612923... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.10G015500.1 | Ceric.10G015500 | histone *(H3) & original description: pacid=50612308... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.12G022300.1 | Ceric.12G022300 | histone *(H3) & original description: pacid=50601599... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.14G025000.1 | Ceric.14G025000 | histone *(H3) & original description: pacid=50634383... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.14G043400.1 | Ceric.14G043400 | histone *(H3) & original description: pacid=50633664... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.19G072200.1 | Ceric.19G072200 | histone *(H3) & original description: pacid=50576221... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.19G072300.1 | Ceric.19G072300 | histone *(H3) & original description: pacid=50576158... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z177000.1 | Ceric.1Z177000 | histone *(H3) & original description: pacid=50628432... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.27G025200.1 | Ceric.27G025200 | histone *(H3) & original description: pacid=50606238... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.27G026100.1 | Ceric.27G026100 | histone *(H3) & original description: pacid=50605944... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.27G029000.1 | Ceric.27G029000 | histone *(H3) & original description: pacid=50605580... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.27G029300.1 | Ceric.27G029300 | histone *(H3) & original description: pacid=50605405... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.27G029400.1 | Ceric.27G029400 | histone *(H3) & original description: pacid=50605419... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.30G057000.1 | Ceric.30G057000 | histone *(H3) & original description: pacid=50609365... | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g264650 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g265250 | No alias |
Chromatin organisation.histones.H3-type histone | 0.05 | OrthoFinder output from all 47 species | | Cre06.g266650 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g267950 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre06.g268350 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g274000 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre06.g274101 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre06.g274350 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre06.g274850 | No alias | Chromatin organisation.histones.H3-type histone | 0.08 | OrthoFinder output from all 47 species | |
Cre06.g275750 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre06.g276600 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
Cre06.g276850 | No alias | Chromatin organisation.histones.H3-type histone | 0.06 | OrthoFinder output from all 47 species | |
Cre12.g504650 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g504800 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g505500 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g506300 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g506500 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
Cre13.g569950 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre16.g650300 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
Cre17.g708150 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | OrthoFinder output from all 47 species | |
Cre17.g708700 | No alias | Chromatin organisation.histones.H3-type histone | 0.07 | OrthoFinder output from all 47 species | |
Cre17.g709050 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | OrthoFinder output from all 47 species | |
Dac_g12416 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g27747 | No alias | histone *(H3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g27287 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026582001 | No alias | Histone H3.2 OS=Pisum sativum | 0.03 | OrthoFinder output from all 47 species | |
Gb_19430 | No alias | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Gb_29026 | No alias | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
Gb_30564 | No alias | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Gb_40804 | No alias | histone (H3) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g64640.1 | LOC_Os01g64640 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g27310.2 | LOC_Os03g27310 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g34240.1 | LOC_Os04g34240 | histone (H3) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os05g36280.1 | LOC_Os05g36280 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g41080.1 | LOC_Os05g41080 | histone H3 variant (CENH3) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os06g04030.1 | LOC_Os06g04030 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g06460.1 | LOC_Os06g06460 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g05730.1 | LOC_Os11g05730 | histone (H3) | 0.07 | OrthoFinder output from all 47 species | |
Len_g06032 | No alias | histone *(H3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g20676 | No alias | histone *(H3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g45428 | No alias | histone *(H3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10432805g0020 | No alias | histone (H3) | 0.08 | OrthoFinder output from all 47 species | |
MA_113838g0010 | No alias | histone (H3) | 0.06 | OrthoFinder output from all 47 species | |
MA_17527g0010 | No alias | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
MA_210354g0010 | No alias | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
MA_356208g0010 | No alias | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
MA_475294g0010 | No alias | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
MA_56411g0010 | No alias | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
MA_74555g0010 | No alias | Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) | 0.05 | OrthoFinder output from all 47 species | |
Mp3g07730.1 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g22050.1 | No alias | histone H3 variant (CENH3) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g16200.1 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g36081 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c20_8550V3.1 | Pp3c20_8550 | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Pp3c24_13230V3.1 | Pp3c24_13230 | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Sam_g22036 | No alias | histone *(H3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g074000.3.1 | Solyc01g074000 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g080600.4.1 | Solyc01g080600 | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g086820.4.1 | Solyc01g086820 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Solyc05g051500.4.1 | Solyc05g051500 | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g008910.1.1 | Solyc10g008910 | histone (H3) | 0.07 | OrthoFinder output from all 47 species | |
Solyc11g010230.2.1 | Solyc11g010230 | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g056540.1.1 | Solyc12g056540 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Spa_g08360 | No alias | histone H3 variant *(CENH3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g33705 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g42522 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g52114 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g04797 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g45756 | No alias | histone *(H3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008155_P001 | Zm00001e008155 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008160_P001 | Zm00001e008160 | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e016861_P001 | Zm00001e016861 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e018263_P001 | Zm00001e018263 | histone (H3) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e019170_P001 | Zm00001e019170 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e029901_P001 | Zm00001e029901 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e036599_P001 | Zm00001e036599 | histone (H3) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e040856_P001 | Zm00001e040856 | histone (H3) | 0.07 | OrthoFinder output from all 47 species | |
Functional Annotation
Type | GO Term | Name | Evidence | Source |
MF | GO:0003674 | molecular_function | None | Extended |
MF | GO:0003676 | nucleic acid binding | None | Extended |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005488 | binding | None | Extended |
MF | GO:0097159 | organic cyclic compound binding | None | Extended |
MF | GO:1901363 | heterocyclic compound binding | None | Extended |
Type | GO Term | Name | Evidence | Source |
CC | GO:0000786 | nucleosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
IPR007125 | Histone_H2A/H2B/H3 | 1 | 132 |
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