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  5. Nbi_g07712

Nbi_g07712 (TRFL2)


Aliases : TRFL2

Description : telomeric dsDNA-binding protein & original description: none


Gene families : OG0001380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07712

Target Alias Description ECC score Gene Family Method Actions
AT5G13820 ATBP-1, ATTBP1,... telomeric DNA binding protein 1 0.03 OrthoFinder output from all 47 species
Adi_g080925 TRFL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32541.t1 TRFL2, Aspi01Gene32541 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063860 TRFL2 telomeric dsDNA-binding protein & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g07861 TRFL9, ATTBP2 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19415 TRFL2 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05612 TRFL9, ATTBP2 telomeric dsDNA-binding protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12651 TRFL2 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020504 TRFL2 telomeric dsDNA-binding protein & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g09081 No alias telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005590.4.1 TRFL2, Solyc06g005590 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Spa_g31051 TRFL2 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06107 TRFL2 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!