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  5. Nbi_g07663

Nbi_g07663 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel *(SLAC) & original description: none


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07663

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0035.g025471 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=1-1278 0.03 OrthoFinder output from all 47 species
Ehy_g18127 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g43460.2 SLAH3, LOC_Os01g43460 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Lfl_g40254 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001833 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=1-1644 0.03 OrthoFinder output from all 47 species
Tin_g12188 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 342 645
No external refs found!