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  5. Nbi_g07662

Nbi_g07662


Description : not classified & original description: none


Gene families : OG0020872 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0020872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07662
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Aob_g30469 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 438 482
IPR002885 Pentatricopeptide_repeat 610 632
IPR002885 Pentatricopeptide_repeat 335 362
IPR002885 Pentatricopeptide_repeat 234 264
IPR002885 Pentatricopeptide_repeat 134 160
IPR002885 Pentatricopeptide_repeat 307 334
IPR002885 Pentatricopeptide_repeat 509 529
IPR002885 Pentatricopeptide_repeat 701 732
No external refs found!