MA_45580g0010


Description : component CPSF73/Ysh1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. nuclease CPSF73-I


Gene families : OG_01_0001402 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001402_tree ,
OG_02_0004701 (LandPlants) Phylogenetic Tree(s): OG_02_0004701_tree ,
OG_03_0005331 (SeedPlants) Phylogenetic Tree(s): OG_03_0005331_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_45580g0010
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.05 Archaeplastida
Gb_26095 No alias component CPSF73-II of Cleavage and Polyadenylation... 0.03 Archaeplastida
LOC_Os03g63590.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 Archaeplastida
MA_7411g0010 No alias Cleavage and polyadenylation specificity factor subunit... 0.03 Archaeplastida
Solyc04g008030.2.1 No alias component CPSF73-II of Cleavage and Polyadenylation... 0.02 Archaeplastida
Solyc07g049480.3.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.04 Archaeplastida
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.05 Archaeplastida
Zm00001e011638_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 Archaeplastida
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.05 LandPlants
Solyc07g049480.3.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.04 LandPlants
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.05 LandPlants
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.05 SeedPlants
Solyc07g049480.3.1 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.03 SeedPlants
Zm00001e006396_P001 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011108 RMMBL 262 322
IPR001279 Metallo-B-lactamas 3 73
IPR021718 CPSF73-100_C 357 550
IPR022712 Beta_Casp 126 247
No external refs found!