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  5. Nbi_g07614

Nbi_g07614 (RAD5)


Aliases : RAD5

Description : chromatin remodeling factor *(Rad5) & original description: none


Gene families : OG0005250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07614

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G052300.1 RAD5, Ceric.23G052300 chromatin remodeling factor *(Rad5) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01027728001 No alias Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder output from all 47 species
MA_111652g0010 RAD5 chromatin remodeling factor (Rad5) 0.1 OrthoFinder output from all 47 species
Solyc03g005460.4.1 Solyc03g005460 chromatin remodeling factor (Rad5) 0.05 OrthoFinder output from all 47 species
Tin_g03523 RAD5 chromaTin remodeling factor *(Rad5) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e022169_P001 Zm00001e022169 chromatin remodeling factor (Rad5) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014905 HIRAN 202 307
IPR001650 Helicase_C 923 1035
IPR000330 SNF2_N 430 796
No external refs found!