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  5. Nbi_g07608

Nbi_g07608 (TSK, BRU1, MGO3)


Aliases : TSK, BRU1, MGO3

Description : chromatin stabilizing factor *(TSK) & original description: none


Gene families : OG0009270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07608

Target Alias Description ECC score Gene Family Method Actions
AT3G18730 TSK, BRU1, MGO3 tetratricopeptide repeat (TPR)-containing protein 0.02 OrthoFinder output from all 47 species
Aop_g05749 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0090.g042799 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original... 0.05 OrthoFinder output from all 47 species
Ceric.09G039700.1 TSK, BRU1, MGO3,... chromatin stabilizing factor *(TSK) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01026545001 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.06 OrthoFinder output from all 47 species
Len_g59655 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425879g0010 TSK, BRU1, MGO3 Protein TONSOKU OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp6g14510.1 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015119 TSK, BRU1, MGO3 not classified & original description: CDS=1-582 0.04 OrthoFinder output from all 47 species
Smo418913 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.03 OrthoFinder output from all 47 species
Solyc11g005690.3.1 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.07 OrthoFinder output from all 47 species
Tin_g11209 TSK, BRU1, MGO3 chromaTin stabilizing factor *(TSK) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023747_P002 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 957 976
IPR041617 TPR_MalT 186 362
No external refs found!