Nbi_g07407


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07407

Target Alias Description ECC score Gene Family Method Actions
Adi_g076600 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g11835 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g32108 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g30442 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g05983 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g22498 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32844.t1 Aspi01Gene32844 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15392 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g02256 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g19411 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ppi_g39066 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016534 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g13225 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 49 99
IPR025756 Myb_CC_LHEQLE 140 185
No external refs found!