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  5. Nbi_g07405

Nbi_g07405


Description : subunit beta2 of coat protein complex & original description: none


Gene families : OG0000684 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07405
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Aev_g13025 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 39 species
Ala_g02602 No alias subunit beta2 of coat protein complex & original... 0.06 OrthoFinder output from all 39 species
Als_g23306 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Aob_g06720 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 39 species
Aop_g12571 No alias subunit beta2 of coat protein complex & original... 0.06 OrthoFinder output from all 39 species
Azfi_s0001.g000608 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 39 species
Cba_g14578 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Cba_g32368 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Cba_g36928 No alias subunit beta2 of coat protein complex & original... 0.01 OrthoFinder output from all 39 species
Ceric.30G060200.1 Ceric.30G060200 subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Dac_g05778 No alias subunit beta2 of coat protein complex & original... 0.01 OrthoFinder output from all 39 species
Dcu_g04083 No alias subunit beta2 of coat protein complex & original... 0.09 OrthoFinder output from all 39 species
Dde_g02366 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Ehy_g02910 No alias subunit beta2 of coat protein complex & original... 0.01 OrthoFinder output from all 39 species
Ehy_g08641 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 39 species
Gb_26317 No alias subunit beta2 of coat protein complex 0.02 OrthoFinder output from all 39 species
Len_g12266 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 39 species
Len_g46090 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 39 species
Lfl_g05710 No alias subunit beta2 of coat protein complex & original... 0.06 OrthoFinder output from all 39 species
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.03 OrthoFinder output from all 39 species
Msp_g01672 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 39 species
Ore_g10228 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Pir_g14528 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 39 species
Pp3c11_8520V3.1 Pp3c11_8520 Coatomer, beta\ subunit 0.02 OrthoFinder output from all 39 species
Pp3c14_8280V3.1 Pp3c14_8280 Coatomer, beta\ subunit 0.01 OrthoFinder output from all 39 species
Pp3c2_1810V3.1 Pp3c2_1810 Coatomer, beta\ subunit 0.01 OrthoFinder output from all 39 species
Ppi_g01343 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 39 species
Sacu_v1.1_s0058.g014985 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 39 species
Spa_g10496 No alias subunit beta2 of coat protein complex & original... 0.06 OrthoFinder output from all 39 species
Spa_g17544 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 39 species
Spa_g50190 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 39 species
Tin_g02168 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 319 762
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 220 256
IPR001680 WD40_repeat 132 171
IPR001680 WD40_repeat 59 85
IPR001680 WD40_repeat 177 215
No external refs found!