AT1G02910 (LPA1)


Aliases : LPA1

Description : tetratricopeptide repeat (TPR)-containing protein


Gene families : OG_01_0002684 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002684_tree ,
OG_02_0008396 (LandPlants) Phylogenetic Tree(s): OG_02_0008396_tree ,
OG_03_0009562 (SeedPlants) Phylogenetic Tree(s): OG_03_0009562_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02910
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00200960 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.06 Archaeplastida
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 Archaeplastida
Cre10.g430150 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
LOC_Os01g25600.1 No alias LPA1 protein involved in PS-II assembly 0.06 Archaeplastida
LOC_Os04g42800.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 Archaeplastida
MA_10430747g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_173127g0010 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 Archaeplastida
Mp1g21960.1 No alias LPA1 protein involved in PS-II assembly 0.02 Archaeplastida
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 Archaeplastida
Pp3c17_23380V3.1 No alias tetratricopeptide repeat (TPR)-containing protein 0.03 Archaeplastida
Smo134250 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
Solyc09g063140.4.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc09g074880.4.1 No alias No annotation 0.05 Archaeplastida
Zm00001e017629_P003 No alias LPA1 protein involved in PS-II assembly 0.04 Archaeplastida
AMTR_s00045p00200960 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 LandPlants
LOC_Os01g25600.1 No alias LPA1 protein involved in PS-II assembly 0.03 LandPlants
Mp1g21960.1 No alias LPA1 protein involved in PS-II assembly 0.02 LandPlants
Pp3c17_23380V3.1 No alias tetratricopeptide repeat (TPR)-containing protein 0.02 LandPlants
Smo134250 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 LandPlants
Solyc09g074880.4.1 No alias No annotation 0.04 LandPlants
Zm00001e017629_P003 No alias LPA1 protein involved in PS-II assembly 0.04 LandPlants
AMTR_s00045p00200960 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 SeedPlants
LOC_Os01g25600.1 No alias LPA1 protein involved in PS-II assembly 0.03 SeedPlants
Solyc09g074880.4.1 No alias No annotation 0.04 SeedPlants
Zm00001e017629_P003 No alias LPA1 protein involved in PS-II assembly 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0010270 photosystem II oxygen evolving complex assembly IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021883 LPA1-like 183 260
No external refs found!