1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g07252

Nbi_g07252


Description : not classified & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07252

Target Alias Description ECC score Gene Family Method Actions
Adi_g012316 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aob_g07318 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ceric.14G036300.1 Ceric.14G036300 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ceric.22G058100.1 Ceric.22G058100 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dde_g17529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08668 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ppi_g09070 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003699 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e024664_P002 Zm00001e024664 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e027059_P003 Zm00001e027059 component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 171 218
No external refs found!