GSVIVT01037258001


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01037258001
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Gene family
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT1G20230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G14730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Gene family
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
Cpa|evm.model.tig00021435.54 No alias No description available 0.02 Gene family
LOC_Os01g60430 Os01g0819800 No description available 0.03 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.03 Gene family
LOC_Os08g25280 Os08g0340900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.03 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_210823g0010 No alias No description available 0.03 Gene family
MA_5481g0010 No alias No description available 0.04 Gene family
MA_63139g0020 No alias No description available 0.03 Gene family
MA_961981g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Smo90563 PACid_15413443 No description available 0.04 Gene family
Solyc01g081560.2.1 Solyc01g081560.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc02g079260.2.1 Solyc02g079260.2 No description available 0.03 Gene family
Solyc03g098420.3.1 Solyc03g098420.3 No description available 0.06 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.07 Gene family
Solyc07g008480.2.1 Solyc07g008480.2 No description available 0.05 Gene family
Solyc09g007040.1.1 Solyc09g007040.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.03 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 277 323
IPR002885 Pentatricopeptide_repeat 175 223
IPR002885 Pentatricopeptide_repeat 73 123
IPR002885 Pentatricopeptide_repeat 251 275
IPR002885 Pentatricopeptide_repeat 350 410
No external refs found!