Nbi_g07177

Description : nucleotidyl transferase component *(TRL) of TRAMP RNA-exosome-regulation complex & original description: none

Gene families : OG0001897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001897_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g07177
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
Aob_g06675	No alias	nucleotidyl transferase component *(TRL) of TRAMP...	0.02	OrthoFinder output from all 47 species
Aop_g12669	No alias	nucleotidyl transferase component *(TRL) of TRAMP...	0.02	OrthoFinder output from all 47 species
Cre09.g410500	No alias	No description available	0.01	OrthoFinder output from all 47 species
LOC_Os01g48210.1	LOC_Os01g48210	poly(A) RNA polymerase (TRF4)	0.02	OrthoFinder output from all 47 species
Mp3g05650.1	No alias	poly(A) RNA polymerase (TRF4)	0.02	OrthoFinder output from all 47 species
Pir_g10073	No alias	nucleotidyl transferase component *(TRL) of TRAMP...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002058	PAP_assoc	319	376
IPR002934	Polymerase_NTP_transf_dom	97	189

External Links

No external refs found!