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  5. Nbi_g07148

Nbi_g07148 (BAT1)


Aliases : BAT1

Description : gamma-aminobutyric acid transporter *(GABP) & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07148

Target Alias Description ECC score Gene Family Method Actions
Adi_g104675 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g24862 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g12915 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g00992 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g14455 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32417 BAT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10355 No alias gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 26 483
No external refs found!