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  5. Nbi_g07145

Nbi_g07145


Description : regulatory protein *(ATG16) of autophagosome & original description: none


Gene families : OG0006453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006453_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07145

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene52558.t1 Aspi01Gene52558 regulatory protein *(ATG16) of autophagosome & original... 0.06 OrthoFinder output from all 47 species
Ore_g27628 No alias regulatory protein *(ATG16) of autophagosome & original... 0.02 OrthoFinder output from all 47 species
Pnu_g08005 No alias regulatory protein *(ATG16) of autophagosome & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 262 299
IPR001680 WD40_repeat 306 342
IPR001680 WD40_repeat 222 257
IPR001680 WD40_repeat 349 383
IPR001680 WD40_repeat 439 471
IPR013923 Autophagy-rel_prot_16_dom 45 172
No external refs found!