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  5. Nbi_g07140

Nbi_g07140 (ELF3, PYK20)


Aliases : ELF3, PYK20

Description : component *(ELF3) of circadian clock Evening complex (EC) & original description: none


Gene families : OG0001659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001659_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07140

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g38530.1 ELF3, PYK20,... transcription factor (ELF3). component ELF3 of circadian... 0.02 OrthoFinder output from all 47 species
Ore_g15488 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Solyc12g095900.2.1 ELF3, PYK20,... transcription factor (ELF3). component ELF3 of circadian... 0.02 OrthoFinder output from all 47 species
Zm00001e032561_P002 ELF3, PYK20,... transcription factor (ELF3). component ELF3 of circadian... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!