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  5. Nbi_g07092

Nbi_g07092


Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07092

Target Alias Description ECC score Gene Family Method Actions
Cre04.g214501 RIF10, PNP RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
Dac_g29233 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dde_g30979 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07310.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.03 OrthoFinder output from all 47 species
Msp_g14489 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Pnu_g07843 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e032889_P001 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003029 S1_domain 679 738
IPR001247 ExoRNase_PH_dom1 64 192
IPR001247 ExoRNase_PH_dom1 373 506
IPR004088 KH_dom_type_1 615 670
IPR015848 PNPase_PH_RNA-bd_bac/org-type 290 370
IPR015847 ExoRNase_PH_dom2 195 257
No external refs found!