Nbi_g07082


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07082

Target Alias Description ECC score Gene Family Method Actions
Adi_g001198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0601.g078900 No alias not classified & original description: CDS=275-3754 0.04 OrthoFinder output from all 47 species
Ceric.35G031200.1 Ceric.35G031200 not classified & original description: pacid=50581090... 0.04 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g031580.3.1 Solyc09g031580 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g04858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 16 100
IPR032308 TDBD 719 770
No external refs found!