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  5. Nbi_g06978

Nbi_g06978


Description : not classified & original description: none


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06978

Target Alias Description ECC score Gene Family Method Actions
Aop_g14467 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.08G035800.1 Ceric.08G035800 not classified & original description: pacid=50638697... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.79 ATX3, SDG14 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Dcu_g14797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014083001 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_23341 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_37406g0010 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc07g062100.4.1 Solyc07g062100 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 340 390
No external refs found!