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  5. Nbi_g06940

Nbi_g06940 (PARLL1, NUC-L2, ATNUC-L2)


Aliases : PARLL1, NUC-L2, ATNUC-L2

Description : regulatory protein *(NCL) of rRNA transcription & original description: none


Gene families : OG0001950 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06940

Target Alias Description ECC score Gene Family Method Actions
AT1G48920 PARL1, ATNUC-L1, NUC-L1 nucleolin like 1 0.02 OrthoFinder output from all 47 species
Ceric.05G016700.1 PARLL1, NUC-L2,... regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Ceric.13G070500.1 PARLL1, NUC-L2,... regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Ceric.15G060200.1 PARL1, ATNUC-L1,... regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Cre06.g275100 PARLL1, NUC-L2, ATNUC-L2 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.05 OrthoFinder output from all 47 species
Ehy_g24155 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Gb_32672 PARL1, ATNUC-L1, NUC-L1 rDNA chromatin transcription factor (NCL) 0.03 OrthoFinder output from all 47 species
LOC_Os04g52960.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.02 OrthoFinder output from all 47 species
MA_11380g0030 PARLL1, NUC-L2, ATNUC-L2 rDNA chromatin transcription factor (NCL) 0.02 OrthoFinder output from all 47 species
Mp1g21390.1 PARL1, ATNUC-L1, NUC-L1 rDNA chromatin transcription factor (NCL) 0.04 OrthoFinder output from all 47 species
Ppi_g01925 CID13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57117 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Zm00001e021609_P004 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 499 566
IPR000504 RRM_dom 614 674
No external refs found!