Nbi_g06931

Description : translation elongation factor *(EF-P) & original description: none

Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g06931
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AT3G08740	No alias	elongation factor P (EF-P) family protein	0.07	OrthoFinder output from all 47 species
Als_g20082	No alias	translation elongation factor *(EF-P) & original...	0.02	OrthoFinder output from all 47 species
Aob_g02958	No alias	translation elongation factor *(EF-P) & original...	0.04	OrthoFinder output from all 47 species
Aop_g13148	No alias	translation elongation factor *(EF-P) & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0359.g066840	No alias	translation elongation factor *(EF-P) & original...	0.06	OrthoFinder output from all 47 species
Ceric.24G041300.1	Ceric.24G041300	translation elongation factor *(EF-P) & original...	0.04	OrthoFinder output from all 47 species
Dde_g00267	No alias	translation elongation factor *(EF-P) & original...	0.05	OrthoFinder output from all 47 species
Ehy_g00568	No alias	translation elongation factor *(EF-P) & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01030181001	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
LOC_Os11g02450.1	LOC_Os11g02450	EF-P translation elongation factor	0.07	OrthoFinder output from all 47 species
LOC_Os12g02380.1	LOC_Os12g02380	EF-P translation elongation factor	0.03	OrthoFinder output from all 47 species
Len_g01053	No alias	translation elongation factor *(EF-P) & original...	0.04	OrthoFinder output from all 47 species
Mp4g02120.1	No alias	EF-P translation elongation factor	0.09	OrthoFinder output from all 47 species
Msp_g01862	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Ore_g18750	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Sam_g14867	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Solyc10g075020.3.1	Solyc10g075020	EF-P translation elongation factor	0.04	OrthoFinder output from all 47 species
Spa_g11669	No alias	translation elongation factor *(EF-P) & original...	0.12	OrthoFinder output from all 47 species
Tin_g16258	No alias	translation elongation factor *(EF-P) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e039313_P003	Zm00001e039313	EF-P translation elongation factor	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015365	Elong-fact-P_C	176	231
IPR013185	Transl_elong_KOW-like	50	107
IPR001059	Transl_elong_P/YeiP_cen	118	168

External Links

No external refs found!

Nbi_g06931

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation