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  5. Nbi_g06825

Nbi_g06825 (NUP155)


Aliases : NUP155

Description : scaffold nucleoporin of nuclear pore complex *(NUP155) & original description: none


Gene families : OG0004159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06825

Target Alias Description ECC score Gene Family Method Actions
Ala_g08015 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.04 OrthoFinder output from all 47 species
Als_g01209 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Aop_g13988 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Ceric.28G038900.1 NUP155, Ceric.28G038900 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Cre09.g394350 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dac_g15658 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Dcu_g51868 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.06 OrthoFinder output from all 47 species
MA_10429005g0010 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
MA_163460g0010 NUP155 Nuclear pore complex protein NUP155 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g37203 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Ppi_g04712 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Zm00001e000883_P002 NUP155, Zm00001e000883 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Zm00001e038690_P002 NUP155, Zm00001e038690 NUP155 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR014908 Nucleoporin_Nup133/Nup155_N 64 539
IPR007187 Nucleoporin_Nup133/Nup155_C 856 1287
No external refs found!