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  5. Nbi_g06813

Nbi_g06813


Description : strigolactone signal modulator *(SMXL) & original description: none


Gene families : OG0002073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06813
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.03 OrthoFinder output from all 47 species
AT3G52490 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 OrthoFinder output from all 47 species
Ala_g04220 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Dac_g13638 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04977 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g00958 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09621 No alias SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
LOC_Os08g15230.1 LOC_Os08g15230 SMXL strigolactone signal transducer 0.03 OrthoFinder output from all 47 species
Len_g07319 No alias strigolactone signal modulator *(SMXL) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g23977 No alias strigolactone signal modulator *(SMXL) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020044 No alias strigolactone signal modulator *(SMXL) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g007260.3.1 Solyc01g007260 SMXL strigolactone signal transducer 0.02 OrthoFinder output from all 47 species
Solyc07g006540.3.1 Solyc07g006540 SMXL strigolactone signal transducer 0.02 OrthoFinder output from all 47 species
Zm00001e024175_P002 Zm00001e024175 SMXL strigolactone signal transducer 0.02 OrthoFinder output from all 47 species
Zm00001e030230_P001 Zm00001e030230 SMXL strigolactone signal transducer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 129 166
IPR004176 Clp_R_dom 23 54
No external refs found!