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  5. Nbi_g06795

Nbi_g06795


Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06795
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Aev_g18686 No alias DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00752.t1 Aspi01Gene00752 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037858 No alias DNA bending architectural protein *(HMG-B) & original... 0.05 OrthoFinder output from all 47 species
Dde_g05306 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26907 No alias DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
MA_2809g0010 No alias High mobility group B protein 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_48961g0010 No alias High mobility group B protein 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5840g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_904340g0010 No alias High mobility group B protein 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013036 No alias not classified & original description: CDS=1-1740 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 503 567
IPR001606 ARID_dom 272 355
No external refs found!