AT1G02340 (HFR1, FBI1, REP1, RSF1)


Aliases : HFR1, FBI1, REP1, RSF1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0042689 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02340
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c1_38820V3.1 No alias phytochrome interacting factor 3 0.03 Archaeplastida
Solyc06g008030.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
GSVIVT01026516001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Mp3g17350.1 No alias transcription factor (bHLH) 0.03 LandPlants
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
Pp3c17_21890V3.1 No alias phytochrome interacting factor 3 0.02 LandPlants
Pp3c1_38820V3.1 No alias phytochrome interacting factor 3 0.03 LandPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc06g008030.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.02 LandPlants

Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003712 transcription coregulator activity IMP Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005634 nucleus TAS Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0007165 signal transduction TAS Interproscan
BP GO:0007623 circadian rhythm RCA Interproscan
BP GO:0009585 red, far-red light phototransduction TAS Interproscan
BP GO:0009630 gravitropism RCA Interproscan
BP GO:0009642 response to light intensity IEP Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway IMP Interproscan
BP GO:0009785 blue light signaling pathway TAS Interproscan
BP GO:0010017 red or far-red light signaling pathway RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 144 184
No external refs found!