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Nbi_g06659


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g06659

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00247110 SKIP4,... F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00244540 SKIP6,... F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00211260 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Aev_g00907 SKIP6 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Aev_g04076 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Aev_g48815 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.22G041400.1 SKIP6, Ceric.22G041400 not classified & original description: pacid=50613861... 0.09 OrthoFinder output from all 47 species
Dcu_g05397 SKIP6 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g15274 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Gb_06675 No alias F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Len_g02329 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Lfl_g39825 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Msp_g47852 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g15800 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 211 258
IPR006652 Kelch_1 168 208
IPR001810 F-box_dom 76 110
No external refs found!