Nbi_g06340 (ATMBD9, MBD9)

Aliases : ATMBD9, MBD9

Description : component *(MBD9) of SWR1 chromatin remodeling complex & original description: none

Gene families : OG0006226 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0006226_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g06340
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
Ala_g17040	ATMBD9, MBD9	component *(MBD9) of SWR1 chromatin remodeling complex &...	0.04	OrthoFinder output from all 39 species
Azfi_s0092.g043010	ATMBD9, MBD9	component *(MBD9) of SWR1 chromatin remodeling complex &...	0.03	OrthoFinder output from all 39 species
Msp_g32029	No alias	component *(MBD9) of SWR1 chromatin remodeling complex &...	0.06	OrthoFinder output from all 39 species
Pir_g15536	ATMBD9, MBD9	component *(MBD9) of SWR1 chromatin remodeling complex &...	0.03	OrthoFinder output from all 39 species
Spa_g49760	ATMBD9, MBD9	component *(MBD9) of SWR1 chromatin remodeling complex &...	0.03	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	1265	1311
IPR028942	WHIM1_dom	1350	1389
IPR028941	WHIM2_dom	1691	1799

External Links

No external refs found!