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  5. AT1G01980

AT1G01980


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000172 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000172_tree ,
OG_02_0000076 (LandPlants) Phylogenetic Tree(s): OG_02_0000076_tree ,
OG_03_0000069 (SeedPlants) Phylogenetic Tree(s): OG_03_0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G01980
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT5G44360 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
Gb_24403 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Gb_24416 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os02g14090.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
LOC_Os06g35590.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_10144220g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_162773g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_186285g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_5468901g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_613919g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g022860.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g070070.1.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g065070.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e021718_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os06g35590.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
MA_10144220g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
MA_162773g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
MA_186285g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
MA_5468901g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
MA_613919g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Solyc06g065070.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AT5G44400 No alias FAD-binding Berberine family protein 0.03 SeedPlants
Gb_21183 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os06g35590.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 SeedPlants
MA_186285g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
MA_228933g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012951 BBE 476 532
IPR006094 Oxid_FAD_bind_N 80 221
No external refs found!