Nbi_g06317


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06317

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00042600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.1 OrthoFinder output from all 47 species
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g07720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18600 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44166 OTP85 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45732 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g74985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G011500.1 Ceric.03G011500 not classified & original description: pacid=50571528... 0.03 OrthoFinder output from all 47 species
Ceric.29G081200.1 OTP86, Ceric.29G081200 not classified & original description: pacid=50624479... 0.04 OrthoFinder output from all 47 species
Dac_g05254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08431 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g19229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06624 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g30253 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41127 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46048 RARE1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07600 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01222 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06858 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36007 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52827 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Tin_g16670 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25577 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 274 320
IPR002885 Pentatricopeptide_repeat 375 421
IPR002885 Pentatricopeptide_repeat 476 522
IPR002885 Pentatricopeptide_repeat 173 218
IPR002885 Pentatricopeptide_repeat 884 926
IPR002885 Pentatricopeptide_repeat 781 809
IPR002885 Pentatricopeptide_repeat 349 371
IPR002885 Pentatricopeptide_repeat 753 779
IPR002885 Pentatricopeptide_repeat 74 98
IPR002885 Pentatricopeptide_repeat 580 609
IPR002885 Pentatricopeptide_repeat 854 877
IPR002885 Pentatricopeptide_repeat 680 710
IPR002885 Pentatricopeptide_repeat 652 674
IPR002885 Pentatricopeptide_repeat 248 268
IPR002885 Pentatricopeptide_repeat 954 978
IPR002885 Pentatricopeptide_repeat 551 577
IPR002885 Pentatricopeptide_repeat 447 471
No external refs found!