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Nbi_g06279 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g06279
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Ehy_g04863 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g07920 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Gb_30742 TIR1 Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g63420.1 COI1, LOC_Os01g63420 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
MA_263909g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.05 OrthoFinder output from all 47 species
MA_92309g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Ppi_g15539 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Zm00001e008324_P001 AFB2, Zm00001e008324 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 160 179
IPR041101 Transp_inhibit 72 118
IPR041567 COI1_F-box 14 52
No external refs found!