MA_42083g0010

Description : DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana (sp|q9lz03|top6a_arath : 651.0)

Gene families : OG_01_0001077 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001077_tree ,
OG_02_0005722 (LandPlants) Phylogenetic Tree(s): OG_02_0005722_tree ,
OG_03_0006601 (SeedPlants) Phylogenetic Tree(s): OG_03_0006601_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_42083g0010
Cluster	HCCA: Cluster_388

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01025540001	No alias	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana	0.03	Archaeplastida
MA_8091373g0010	No alias	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_8091373g0010	No alias	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana...	0.02	LandPlants
MA_8091373g0010	No alias	DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana...	0.02	SeedPlants
Zm00001e001286_P001	No alias	DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp....	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005694	chromosome	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013049	Spo11/TopoVI_A_N	142	203

External Links

No external refs found!

MA_42083g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation