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Nbi_g06235


Description : RNA helicase *(SMA1) & original description: none


Gene families : OG0002793 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06235

Target Alias Description ECC score Gene Family Method Actions
Dde_g01633 No alias RNA helicase *(SMA1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02138 No alias RNA helicase *(SMA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005420_P001 Zm00001e005420 RNA helicase (Prp28) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 547 656
IPR011545 DEAD/DEAH_box_helicase_dom 323 513
No external refs found!