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  5. Nbi_g06209

Nbi_g06209 (ZFWD1)


Aliases : ZFWD1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06209
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Als_g11103 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aob_g01629 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0312.g064202 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g17439 ZFWD1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Dde_g04347 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Len_g01330 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
MA_126258g0010 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g02746 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 154 176
IPR001680 WD40_repeat 306 341
IPR001680 WD40_repeat 187 220
IPR001680 WD40_repeat 345 380
No external refs found!