1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g06105

Nbi_g06105 (RABA4D, ATRABA4D)


Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase & original description: none


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06105
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT1G01200 RABA3, ATRAB-A3, ATRABA3 RAB GTPase homolog A3 0.03 OrthoFinder output from all 47 species
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.03 OrthoFinder output from all 47 species
Als_g08712 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09530 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0409.g068486 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: CDS=114-785 0.03 OrthoFinder output from all 47 species
Ceric.20G065400.1 RABA4D,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01032054001 ATRABA4C, RABA4C, SMG1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
LOC_Os10g23100.1 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g12448 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
MA_93200g0020 RABA4D, ATRABA4D Ras-related protein RABA4d OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g03577 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09920 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc10g079030.2.1 RABA4D,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g38230 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47852 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000673_P001 AtRABA4a,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!