GSVIVT01035672001


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007943 (Gene family) Phylogenetic Tree(s): OG0007943_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01035672001
Cluster HCCA cluster: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT5G21222 No alias protein kinase family protein 0.08 Gene family
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Gene family
MA_38077g0010 No alias 29.4 protein.postranslational modification protein... 0.02 Gene family
Solyc08g068230.3.1 Solyc08g068230.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Zm00001d020775 GRMZM2G003869 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 309 363
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 421 468
IPR002885 Pentatricopeptide_repeat 246 295
IPR002885 Pentatricopeptide_repeat 390 419
IPR002885 Pentatricopeptide_repeat 215 244
No external refs found!