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  5. Nbi_g05893

Nbi_g05893 (EMB2656)


Aliases : EMB2656

Description : component *(CAP-G) of condensin I complex & original description: none


Gene families : OG0004871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05893
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00100190 EMB2656,... Cell cycle.mitosis and meiosis.chromatin... 0.14 OrthoFinder output from all 47 species
AT5G37630 EMB2656 ARM repeat superfamily protein 0.18 OrthoFinder output from all 47 species
Ala_g23197 EMB2656 component *(CAP-G) of condensin I complex & original... 0.2 OrthoFinder output from all 47 species
Als_g03255 EMB2656 component *(CAP-G) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g09315 EMB2656 component *(CAP-G) of condensin I complex & original... 0.28 OrthoFinder output from all 47 species
Aspi01Gene70823.t1 EMB2656, Aspi01Gene70823 component *(CAP-G) of condensin I complex & original... 0.19 OrthoFinder output from all 47 species
Azfi_s0120.g046764 EMB2656 component *(CAP-G) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.32G002700.1 EMB2656, Ceric.32G002700 component *(CAP-G) of condensin I complex & original... 0.27 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.22 No alias No description available 0.09 OrthoFinder output from all 47 species
Cre08.g362500 No alias Cell cycle.mitosis and meiosis.chromatin... 0.07 OrthoFinder output from all 47 species
Dac_g15975 EMB2656 component *(CAP-G) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014028001 EMB2656 Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
Gb_36529 EMB2656 component CAP-G of condensin I complex 0.22 OrthoFinder output from all 47 species
LOC_Os06g14460.1 EMB2656, LOC_Os06g14460 component CAP-G of condensin I complex 0.16 OrthoFinder output from all 47 species
Len_g02419 EMB2656 component *(CAP-G) of condensin I complex & original... 0.15 OrthoFinder output from all 47 species
Lfl_g38796 EMB2656 component *(CAP-G) of condensin I complex & original... 0.04 OrthoFinder output from all 47 species
MA_1138812g0010 EMB2656 component CAP-G of condensin I complex 0.15 OrthoFinder output from all 47 species
MA_15527g0010 EMB2656 component CAP-G of condensin I complex 0.15 OrthoFinder output from all 47 species
Mp5g14270.1 EMB2656 component CAP-G of condensin I complex 0.21 OrthoFinder output from all 47 species
Msp_g31445 EMB2656 component *(CAP-G) of condensin I complex & original... 0.3 OrthoFinder output from all 47 species
Ppi_g15050 EMB2656 component *(CAP-G) of condensin I complex & original... 0.15 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016204 EMB2656 component *(CAP-G) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Smo75276 EMB2656 Cell cycle.mitosis and meiosis.chromatin... 0.12 OrthoFinder output from all 47 species
Solyc11g011370.2.1 EMB2656, Solyc11g011370 component CAP-G of condensin I complex 0.14 OrthoFinder output from all 47 species
Spa_g46563 EMB2656 component *(CAP-G) of condensin I complex & original... 0.12 OrthoFinder output from all 47 species
Tin_g11702 EMB2656 component *(CAP-G) of condensin I complex & original... 0.22 OrthoFinder output from all 47 species
Zm00001e036753_P002 EMB2656, Zm00001e036753 component CAP-G of condensin I complex 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR025977 Cnd3_C 521 868
No external refs found!