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  5. Nbi_g05749

Nbi_g05749


Description : not classified & original description: none


Gene families : OG0027291 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0027291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05749

Target Alias Description ECC score Gene Family Method Actions
Len_g25825 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Sacu_v1.1_s0111.g020712 EMB2758 not classified & original description: CDS=1-2046 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 317 344
IPR002885 Pentatricopeptide_repeat 254 280
IPR002885 Pentatricopeptide_repeat 282 312
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 178 224
No external refs found!