GSVIVT01035204001


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. auxin response factor 8 (ARF8)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01035204001
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g57610 Os04g0671900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os11g32110 Os11g0523800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_92651g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc01g096070.3.1 Solyc01g096070.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc02g037530.3.1 Solyc02g037530.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d001945 GRMZM2G034840 No description available 0.03 Gene family
Zm00001d002929 GRMZM5G808366 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d026687 GRMZM2G023813 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d032683 GRMZM2G153233 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d039006 GRMZM2G030710 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d043922 GRMZM2G437460 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 230
IPR010525 Auxin_resp 255 338
No external refs found!