GSVIVT01035047001


Description : 29.3.1 protein.targeting.nucleus Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. importin alpha isoform 2 (IMPA-2)


Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01035047001
Cluster HCCA cluster: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT3G06720 IMPA-1, IMPA1,... importin alpha isoform 1 0.03 Gene family
AT4G16143 IMPA-2 importin alpha isoform 2 0.03 Gene family
Cpa|evm.model.tig00021721.27 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.04 Gene family
Cre04.g215850 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.02 Gene family
Smo266556 PACid_15409102 No description available 0.03 Gene family
Solyc01g060470.3.1 Solyc01g060470.3 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
Zm00001d008345 GRMZM2G088231 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family
Zm00001d009850 GRMZM2G088088 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.08 Gene family
Zm00001d037606 GRMZM2G009845 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.06 Gene family
Zm00001d040274 GRMZM2G091119 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032413 Arm_3 456 500
IPR002652 Importin-a_IBB 12 94
IPR000225 Armadillo 358 397
IPR000225 Armadillo 147 186
IPR000225 Armadillo 105 145
IPR000225 Armadillo 274 312
IPR000225 Armadillo 402 439
IPR000225 Armadillo 318 356
IPR000225 Armadillo 189 230
IPR000225 Armadillo 243 271
No external refs found!