GSVIVT01035033001


Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. beta-xylosidase 1 (BXL1)


Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01035033001
Cluster HCCA cluster: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.03 Gene family
AT5G64570 XYL4, ATBXL4 beta-D-xylosidase 4 0.01 Gene family
MA_140124g0010 No alias 10.6.2 cell... 0.03 Gene family
MA_182289g0020 No alias 10.6.2 cell... 0.02 Gene family
MA_99945g0010 No alias 10.6.2 cell... 0.03 Gene family
Smo419541 PACid_15410480 No description available 0.02 Gene family
Solyc11g044910.2.1 Solyc11g044910.2 10.6.2 cell... 0.03 Gene family
Zm00001d002853 GRMZM2G177923 10.6.2 cell... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 393 623
IPR026891 Fn3-like 657 721
IPR001764 Glyco_hydro_3_N 108 349
No external refs found!