GSVIVT01034745001


Description : 34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 6 (PDR6)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01034745001
Cluster HCCA cluster: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.01 Gene family
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 Gene family
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.01 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017337001 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01028207001 No alias 34.16 transport.ABC transporters and multidrug... 0.07 Gene family
GSVIVT01034748001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01035715001 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01035784001 No alias 34.16 transport.ABC transporters and multidrug... 0.07 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os09g16449 Os09g0333500 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
MA_17319g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Smo429390 PACid_15416241 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Solyc01g101070.3.1 Solyc01g101070.3 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Solyc02g081870.3.1 Solyc02g081870.3 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Solyc11g007300.2.1 Solyc11g007300.2 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
Zm00001d003354 GRMZM2G479018 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d019951 GRMZM2G012465,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d044443 GRMZM2G143139 34.16 transport.ABC transporters and multidrug... 0.01 Gene family

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029481 ABC_trans_N 882 947
IPR025314 DUF4219 14 40
IPR003439 ABC_transporter-like 1626 1774
IPR013581 PDR_assoc 1463 1521
IPR003439 ABC_transporter-like 973 1150
IPR013525 ABC_2_trans 1920 2132
IPR013525 ABC_2_trans 1238 1450
IPR001584 Integrase_cat-core 521 637
IPR025724 GAG-pre-integrase_dom 454 507
No external refs found!